Quick Picks : Brainbow flies

8 02 2011

Nature methods published two papers which extend brainbow-like techniques of stochastic multicolored neuronal labeling into fruit flies.  Nature’s summary explains the two methods.

 

dBrainbow expression examples

 

 

The first technique, called dBrainbow, was developed by Julie Simpson, a neuroscientist at the Howard Hughes Medical Institute’s Janelia Farm Research Campus in Ashburn, Virginia, and her colleagues2. This method uses enzymes called recombinases to randomly delete some of the colour-producing genes from the string, leaving different genes next to the promoter regions in different cells. Individual cells are therefore uniquely coloured and so can be easily distinguished…

dBrainbow genetic scheme

The second technique, called Flybow, was developed by Salecker and her colleagues3. They used an enzyme that ‘flips’ pairs of colour-producing genes on the string, leaving different genes next to the promoter region. The ‘flipping’ enzyme is also a recombinase, and so after being inverted, some of the colour-producing genes are randomly deleted. This ensures that all the different genes on the string can potentially end up next to the promoter, and be displayed by individual modified neurons.. Flybow uses a single string of four colours — red, green, blue and yellow.

Flybow genetic scheme

These techniques will find use in building the structural and functional connectome of the fly.

 


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2 responses

10 10 2011
Brain Shirts

This technique for visualizing neurons in the fly brain is quite amazing. I’ve always been impressed by the brainbow technique (visually and scientifically), and I especially love the stochasticity of it all. Thanks for sharing!

11 02 2013
elpi

I think there should always be a reference of Livet et al , Nature 2007 when talking about any BRAINBOW technique

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